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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78193403, gi|...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNGKAYIRQP NDPRKQKQII ILSCFVAALF FLLLTRLWYL QIVKAEDFQN KSESNRLRLV  60
   61 PVAASRGTIF DRNGTVLVSN RPSFSVAVIP QEVKDRDALL DQLSAYLDID RAELLEKWEK 120
  121 GKGRARYHPI VLASGITRDQ LELLEEKRLW LPGLEIEVKP VRQYEAGVLA SHLLGYLGEV 180
  181 SDDELKSDAY AGYNSGDYIG KSGIERNWER VLHGKDGGRQ IEVDARGRIL RTLSETPPTV 240
  241 GSSLVLTIDA ELQKRTEQSF GEQAGAAVVM DVNTGDILAF ASNPDFDPAL FTGRMPPEKW 300
  301 KEYLEDKRHP LENKALKGQY PPGSTFKIIT ALAGLEEGLI DEKTSVVCRG TYTLGASKFG 360
  361 CWERKGHGTV NLRRALKESC DVYFYQLGER LGINKIAAYA RALGMGSPMG VGLDNEKGGL 420
  421 IPTSEWKEKR HKKKWLQGDT LPAAIGQGYV LMTPIQLASM IATVATDGVV YRPHLVKRII 480
  481 DQDGRALQEF KPEVIARPRI SARSFRLVKE GLSAVVNDPG GTGARARLYQ VQVAGKTGTS 540
  541 QVVKLRDNRG GIPYQYRDHA LFVAFAPYDK PEVAVAVVIE HGEHGGSAAA PIAGNILRAY 600
  601 FEGKGSIRKP VRKDVPSETG EQAGQETPAS EQGGSASQGQ QEQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle