YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|48845025, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPDLIVTGSL CTRCGACVAT CPARIIELPK GVPRFTATGE ARCIICGHCE AVCPTAALTV  60
   61 NDPRLDPTVP PPPEAPLPPE ILDAYLRMRR SIRRFRTEAV PRKTIESLLD VVRYAPTSSN 120
  121 RQAVRWLVIH DTAEVRRLTG LVIDWFRSRL ADPSCPNRTT LAAMIRSWNN GSDPICRNAP 180
  181 HLVIPCTPRQ HSLAPFDATI AAAHLEIVAP AHGIGTCWGG YFQMAAEVWE PLRLALNLSD 240
  241 GYYPECALLL GYPATTYRRP PKRNRLDVTW R

Type	Start	End	Confidence
Signal Peptide	1	16	0.53
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	271	0.97