YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46561992
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVWIFFLFC LAGKTLAAPT EEEPAVEEEL EVGINPVQVE TGEFDEAIEV VEDVIAENPC  60
   61 LNHHCKKGKV CEVDDSNQPM CVCQDPLTCP APIGDFEHVC GTNNKTYESS CHFFATKCSL 120
  121 EGTKKGHKLH MDYIGPCKYI APCLENELNE FPLRMRDWLK NVLVTLYERD EDNNLLTEKQ 180
  181 KLRVKKIYEN EKRLQAGDHS LDLLALDFEK NYNMYIFPVH WQFGQLDQHP IDGFLSHTEL 240
  241 APLRAPLIPM EHCTTSFFEQ CDADQDKYIA LEEWANCFGI KEQDVDKDLV I

Type	Start	End	Confidence
Signal Peptide	1	17	0.99
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	291	0.99