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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73668585, gi|...
Protein type: Transmembrane
Type Confidence: 0.80
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVSRKILAI IYIIFALLIS VVIFASQSIL GSTFSDLQEK EVTDNVEKVE SMIELQILQL  60
   61 EKINSVLSSR DDVRNLMLNQ DFQNLSSGTS LDDIFSISGC DFIFLVNNSG YIVYSDISDP 120
  121 EPSTNASALN ASILNVSILN VSTLNASPLP KVRQRINDGS FLCKGAETSL KGLFMLKNDP 180
  181 AIISSQPVSA APESKEISGT IILGKYLDSS FIESVQESTG STFTLYSFNN ASSDLLQAFF 240
  241 ENPGPNFTYT VTGEHTTCYS VLEDLSGSPA IVIRADAGSN IYAEGQEALR YIVFFLLFAG 300
  301 LMIGASCKFL LDREVVSRIV AIDNFVEKVG MNENFSERYF MEGDDELSRL SKGINQTLDR 360
  361 LRTTSNEFKA QEHEKKLILD SLSELVVFMD SELKIIWLNK AALDHMGMKI NDVIGRHYQD 420
  421 MYILYKENPG KSPVLKVLES GNEEFGEVVT QDGKIWTVTA IPIKNEDGRI TGILKTGLDI 480
  481 TAHRRSEEKL IQAKLEAEEA NNSKSEFLAN VSHELRTPLN SIIGFSDILI EKVFGELNEK 540
  541 QFRYVNNIST SGKHLLVLIN DILDLSKVEA GKMELHYSEF SIDPVFEEVK AVLFPLIQAK 600
  601 PLEVTFNVEP DFTTLEADRG RLIQILYNLI SNAIKFTPNG GKVSVYCKES GNRALISVID 660
  661 TGIGISAEDQ VKLFQPFTQL DASTSRQYCG TGLGLALVKK IVNLHQGDIW VESDPGKGSN 720
  721 FTFALPLRKP LERRKVSEIG IEDVTIEFEM NKAEALSVKE NAENLQEEVK LPEICHSEKG 780
  781 DVKQELILVV DDDKSSSELH STILKDAGYS VAILYSGKRV LEVAKNLKPD IITLDVFLPG 840
  841 TNGWLVLRQL KNDPYTTSIP VLIISMTNNN ELGITLGATY SFAKPVNRIE LVNSLREITG 900
  901 KFRFEYPKVL IVDDDENTVE LLSSMIEPEG FETIKAYSGR ECLQKLFFSE QQPDILILDL 960
  961 MMPEISGFDI ISSMRADVHT KDIPLIVCTS GELTEKNLEE LNSELERHLI SILKKGTFGR1020
 1021 KELINRIKQL AMLKRRNDEK NPDCRR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle