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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73670327, gi|...
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGPEFQAYVG PRPFEQEDKF IFFGRDREAR DLLSLVIAHN LVLVYAQSGA GKTSLLNAGL  60
   61 IPLLEENQFE VFPIVRVKGT ILENITTDEI SNIYVFNTLA SWDEGDYDVE SLAKMKLVDF 120
  121 LNEQEHMLDE DGMPLPRAVI FDQFEEIFSL YQDRWKDREG FFEQVSAALE ADPLLRVIFV 180
  181 MREDFIAQLD PYVYLLPERL RTRFHMERLR SEAALLAIKE PLRYTGRSFA EGVAEKLVED 240
  241 LLKIRVETAP GETAEVTGEF IEAVQLQVVC QNLWRELPPD ITQITFQHLK TYGNVEQELY 300
  301 RFYEEAIEVA TEKTRVDEEG LRRLCGEVLI TTMGTRGMVY RAPEYTYGVP NTAIDVLESM 360
  361 HLIRAEWRAG ARWYELTHDR FIEPILSSNK VFNDKLAEKK RVEKERAEKE RAEKEWAEKE 420
  421 QLEKERLEKE WAERKRAEKE RSRNRVIKGL AAISIIILIL ALSTTYLWIQ TEQNKKGALA 480
  481 SYLNAKSQNL QEYPTTLDES ILLAIESFRI SETLHDERLR QELSLDADKL IRQELLSIPH 540
  541 RVVVLNHNGW VNNVVFSPDG KYAATASNDN TARLWDADTG KQIFVLNHSG WVNNVVFSPD 600
  601 GKYAATASND NTARLWDADT GKQIFVLNHG DWVNNVVFSP DGKYVATASN DNTARLWDAD 660
  661 TGKQIFVLNH NGSVNNAVFS PDGKYIATAS NDNTARLWNA DTGKQIFVLN HNGSVNNAVF 720
  721 SPDGKYIATA SNDNTAGLWD ADTGKQIFVL NHGSWVNNVV FSPDGKYIAT ASFDNTARLW 780
  781 DIATGNSIFA LNHDSWVYDV MFSPDGKYVA TASGDNTARL WDTDTGNPIL IMNHNGSVNN 840
  841 VVFSRDGKYI ATASDDKTAG LWDIAATEVL NHNGPVYGVV FSRDEKYVAT ASGDNTARLW 900
  901 DTDTGKQIFV LNHNGPVYNV VFSPGGKYVA TASKDNTARL WNADTGKQIF VLNHNGRVYN 960
  961 AVFSPDGKYI ATASGDDTAR LWDTDTGKQI FVLNHSGWVY DVVFSPDGKY IATASFDNTA1020
 1021 RLWNAATGEQ IFVLRHSDKV LSAVFSPDGK YVATASNDNT ARLWDADTGK QIFVLNHGSW1080
 1081 VNNVVFSPDG KYIATASNDN TARLWDADTG KQIFVLNHSG WVNNVVFSRD GKYIATASYD1140
 1141 KTARLWNADT GKQVFVLNHN GPVYKVVFSS DGKYVATASD DNKARLWIHN KTEDLIHEAG1200
 1201 NRLTRNLNKE EWKNYMFDEP YDKTFPNLP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle