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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|48833278, gi|...
Protein type: Transmembrane
Type Confidence: 0.63
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTMDAIVRYH QQTKHRTDRY AASPEFMDWD TQPNPFRHYI GAPRLALPRQ AMQQQRPFCH  60
   61 VHQPRAKAEP ITPYNIAAVL GLTLGLAAWK AIPHSEQRWA LRCNPSSGNL HPTEGYLVIP 120
  121 ALGDEHMALP AGVYHYDSYG HALEQRLVVA AGQPWLRHEQ PGFVVGFSSI FWREMWKYGE 180
  181 RAYRYCQLDM GHAVAALSYA AVTMGWRVQV LDGVGDATIT QLLGLPTAAL QKGQPEPEHP 240
  241 DLLVWVSPSG VGAELVQEQV VAWAQSALRG VWQGSPNVLS PRYMHRWPII EEVAQAAERP 300
  301 QRRVELAEIG LPHWPPLAAG PCTKTLSQVI YQRRSAQQFD GKTVLDQAGF YRILDALLPR 360
  361 PGVAPWDSQS WPVALHPLIF VHRVAGLAAG LYQLVRHPDA LAELKQALSA DYVWQTVEGS 420
  421 PEHLPLYRLM SDDLRMSAMI VSCKQAIAGD SAFSMGMLAQ WQRGMQIGAW HYRNMYWEAG 480
  481 MLGQVLYLEA EAEGVRGTGI GCYFDDLFHE RVGGLQGMAW QSLYHFTVGT PLEDVRLTTE 540
  541 PPYGHL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle