YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|117925395, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRPPLSPAQ LRLWQTLCAH ITTHGLPPTV AELSAQLGIK PPSVHAQLQA LARKGWLRHT  60
   61 PHKARSLTPL DEAGQPLLHP KESTPMESRP IMSAPPRVTQ RFRPAEQARF TIPLAGSRVA 120
  121 AGFPSPADDF VEAQLDLNQH LVKHPAATFF VRVAGESMIE AGIHPGDILV VDRSLQPESG 180
  181 QIVIAVLDGE LTVKRLEKRA GKLFLMPANR NFTPIEVGAE ADLLIWGVVT STVHQFGR

Type	Start	End	Confidence
Signal Peptide	1	31	0.68
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	238	0.99