YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|48825126
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRLKKIRLI FLLGIAFLAL AGCKGNGLAN EDILERSKST NEIIWGVKYD TRLFGMMDIE  60
   61 SRTVQGFDVD IAKAITKKIL GDNGKTEFVE VTSKTRIPLL KNGNIDAIIA TMTITDERKK 120
  121 QVDFSDVYFD AGQALLVKKG SQIKSVDDLN ASTTVLAVKG STSAANIRQH APDAKILELE 180
  181 NYAEAFTALQ SGQGDAMTTD NAILLGIADE NPEYELVGGT FTNEPYGIAI NKGQENFLKA 240
  241 VNQALEEMHA DGTYDKIYQK WFPNETEGKV E

Type	Start	End	Confidence
Signal Peptide	1	25	0.97
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	271	0.99