YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|48823891
Protein type:	Globular with Signal Peptide
Type Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNYRVAVLGP GSWGTALAQV LAENGHDVRI WGHRASQVEE INTQHTNQRY LPDHCLPDSI  60
   61 QAFTNMEDAV KDADAVLFVI PTKAIRSVAK ELVPKLNTKP VIIHASKGLE QGTHKRISDI 120
  121 LLEEIPVEKR KAVVVLSGPS HAEEVAKHDI TTITAASTDA KAAKYVQELF MNNYFRIYTN 180
  181 PDVIGVEMGA ALKNIIAIGA GAIHGLGFGD NAKAAIMTRG LAEISRLGVA MGANPLTFIG 240
  241 LSGVGDLVVT CTSVHSRNWR AGNLLGQGQP LEEVLANMGM VVEGVNTTQA AMELAQIMEI 300
  301 EMPITQTIYE VLYEQKEIKT AAKEIMLRDG KKENEFSLTI F

Type	Start	End	Confidence
Signal Peptide	1	22	0.88
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	341	0.96