YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91685822, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNHPVPPAPL RRPFPAELLS ALKAAFAERV SVSEAVRVHH GRDESPFDPQ LPDAVVFART  60
   61 TEDVQNVVKL CGQYNVPVIP YGNGSSLEGH LLAVQGGVSI DLSEMNRVLS INAEDLTVTV 120
  121 EPGISRKQLN EALRDTGLFF PIDPGADASI GGMSATRASG TNAVRYGTMR ENVLGLTVVL 180
  181 ADGRVIKTGT RARKSSAGYD LTRLFVGSEG TLGVITEITV RLYPQPEAVS AAVCTFPSMG 240
  241 DAVRAVIETI QIGVPIARVE FVDSLAIRSI NRHSNLTLRE APTLFFEFHG TEAGVKEQAE 300
  301 LVQEVAAQNA GEGFEWATRP EDRSRLWNAR HNAYFAMLQL KPGCRAVTTD VCVPISRLAE 360
  361 CVEETEQDLK ASPLPCPIVG HVGDGNFHVA ILIDPNKPEE LVEAERLNHR IVERALRMDG 420
  421 TCTGEHGVGL HKMGFLLEEH GEVAVDTMRS IKHALDPHNL MNPGKIFSWA A

Type	Start	End	Confidence
Signal Peptide	1	27	0.65
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	471	0.99