YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91691514, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.69
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLDYIRDGQE IYRQSFATIR AEADLSRIPA DLEKLAVRVI HACGMVDVID DLRFSEGAGP  60
   61 AGRSALARGA PILCDAGMVA QGITRTRLPA NNEVICTLAH PDVPPLAREL GNTRSAAALE 120
  121 LWRPHLAGSV VVIGNAPTAL FHLLDMLDAG APKPALILGF PVGFVGAAES KAMLAEDSRG 180
  181 VPYVVVHGRR GGSAMAAAAV NALATEVE

Type	Start	End	Confidence
Cytoplasmic	1	121	0.66
Transmembrane Helix	122	143	0.60
Non-Cytoplasmic	144	154	0.75
Transmembrane Helix	155	170	0.57
Cytoplasmic	171	208	0.48