YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|91691549, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRYTLLDNQK DAVILAARIL LMVLFIMFGW SKLTGFSGTV AYMTSSGAPV PELSAVIAVV  60
   61 MEFAVGIALL VGFYTRPLAL LLAVYTFGTA IIGHHYWNMT GAMQYDNMIH FYKNISIIGG 120
  121 LLLLCVTGAG KYSIDRR

Type	Start	End	Confidence
Cytoplasmic	1	13	0.93
Transmembrane Helix	14	34	0.88
Non-Cytoplasmic	35	52	0.79
Transmembrane Helix	53	73	0.92
Cytoplasmic	74	77	0.83
Transmembrane Helix	78	97	0.92
Non-Cytoplasmic	98	110	0.88
Transmembrane Helix	111	134	0.84
Cytoplasmic	135	137	0.95