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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|91781279, gi|...
Protein type: Transmembrane
Type Confidence: 0.79
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLHKGRLSTK LKPHYVVEGS LMMPGKTASK VDGYLFQQGV VCALRTLAGA WFVMAVSVSP  60
   61 AQAACAPDGQ GGITNSGGTC SVAPPVNRIT ATGSGTTTAP GVTLAVPYGI AVTASGGASV 120
  121 SLGRSDAGGA PAISALNGGG LTGLFATGVS STITADSLAI GLPSGGGNAA ARATAGGHIT 180
  181 FLNSANITFV PGGGGGTGLL ADGAGSQITG TNVTVAGAGG GGDYVAHSNN GGDIALTGGA 240
  241 LSLNSPGGGG VAVLSENGST FTGDGVAISV SASGGDAAVK SVGNSHVSLS GGSVTLNGTS 300
  301 GETGLLAQGA TLTAVGVPVS VTASQSSAGT VQGGGTLAIT GGSVTASGSG TVGMLVNGAA 360
  361 GAANTLALND TTVTSTADSL HVVGANANIT AAGSTITDNN GVLLSTTGSP STTTFDAGAS 420
  421 TLGGAITTGA GTTTTVTLHD DTDWTVTGNS TATNLTNSAS NIHFTAPADP SQAASYKTLQ 480
  481 VQNYTGADGN LHLNTFLGSD DAPSDKLIVS GGTATGTTNL TIHNTTGPGD MTVADGIQVV 540
  541 QTLNGGTTAS DAFTLTGRLR AGAFDYLLFH GGIGGSRPND WFLRSSFVVP ESITPTVPLS 600
  601 PATPSSPPGE PGTPSSPPGE PGTPSSPPGQ PGTPSSPPGQ PGTPSSPPGQ PGTPSSPPGQ 660
  661 PGTPSSPPGQ PGAPSSPPGQ PETPSSPGQP GGQTTLDVSR PFPADPPASP LQPGVTYPVI 720
  721 GPELATYGVV QPVARQMGFT MLGTLHERIG DTLTADNAGP DSEGWGHSGW ARFFGQQIDN 780
  781 RYQAFASPRA TGQLLGVQAG VDVWRGSLMP GHRDVAGVYF AYGNSNLDVD GLVTNATATA 840
  841 YLLGRTGKLN LDAYSGGAYW THYGPGGWYL DLVLQGTSYQ GEATTQSARL PTTGDGFVTS 900
  901 LEAGYPVPLP LGPRFVLEPQ IQVLWQRVSF DQENDGLGPV DLGSTTGTTG RLGLRGQWTI 960
  961 DGDHGQVWQP YGRVNLWHDW GGRATTLFGV DQVPLRDAAT RLEFAAGVTA KATLRLSLYA1020
 1021 QAGYQFAVGA GENSRRQGVQ GNLGLRYTW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle