YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RUVC_BURXL
Protein type:	Transmembrane
Type Confidence:	0.63
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRILGIDPGL RVTGFGVIDQ SGHTLSYVAS GVIKTADADL PSRLGTIFEG ISTLIRQHSP  60
   61 DQSAIEKVFV NVNPQSTLLL GQARGAAICG LVAGGVPVAE YTALQLKQAV VGYGRATKEQ 120
  121 MQQMVVRLLN LSGVPGTDAA DALGMAICHA HGGTTLSTLG GIAPSLAKKG LRVRRGRLVG 180
  181

Type	Start	End	Confidence
Cytoplasmic	1	84	0.55
Transmembrane Helix	85	99	0.51
Non-Cytoplasmic	100	146	0.83
Transmembrane Helix	147	167	0.54
Cytoplasmic	168	180	0.57