YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	UPPP1_BURXL
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDWLLACKAL ILGVVEGLTE FLPVSSTGHL IVAGSLLNFT DEHAKTFDVV IQLGAILAVC  60
   61 WEYRRRIGSV VSGLPSRPDA RRFTLNVIIA TIPAIVLGLL FEKTIKAALF SPVPVAFALV 120
  121 AGGVVILWAE SRQRTRGETV ARVQNVDDLG ALDALKVGLA QCFALIPGMS RSGSTIIGGM 180
  181 LFGLDRRVAT EFSFFLAIPI IFGATAYELH KDWHLLSVDA LGTFALGFVA AFVSAFACVR 240
  241 WLLRYIAAHD FTAFAWYRIG FGLLILLVGY SGALNWTE

Type	Start	End	Confidence
Cytoplasmic	1	9	0.85
Transmembrane Helix	10	33	0.63
Non-Cytoplasmic	34	43	0.67
Transmembrane Helix	44	63	0.71
Cytoplasmic	64	82	0.92
Transmembrane Helix	83	101	0.97
Non-Cytoplasmic	102	107	0.83
Transmembrane Helix	108	129	0.93
Cytoplasmic	130	187	0.94
Transmembrane Helix	188	207	0.90
Non-Cytoplasmic	208	219	0.79
Transmembrane Helix	220	243	0.89
Cytoplasmic	244	253	0.90
Transmembrane Helix	254	274	0.95
Non-Cytoplasmic	275	278	0.83