YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|93353692, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDRRLPHPI RRLRTSPAIT AALAFVVLST AYGTANAADL KMATTTSTEN SGLLKYLLPK  60
   61 FEQKTGINMK VIAVGSGKAM KMGEMGDVDV LLVHARKMED EFVAAGYGVN RRDVMYNDFI 120
  121 VVGPANDPAN LKGGKDVIAG FKRLAGSGSK FISRGDNSGT DVMEKDYWKK AGIEPKGQPW 180
  181 YVSAGLGMGE VLTMAAQLPG YTLSDRATYG AYRAKTGLAI VLQGDPQMFN PYGVIAVNPA 240
  241 KHPGINYADA MKFVEWVTSK EGQDAIASYK VEGEQLFFPD YKAK

Type	Start	End	Confidence
Signal Peptide	1	37	0.98
N-region	1	28
H-region	29	34
C-region	35	37
Cleavage Site	37	38
Non-Cytoplasmic	38	284	0.99