YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|222871193, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQQHASTAA HGASHGHSSV KSYVIGFVLA VILTVIPFKI VMDGTMERGT MLWIILGMAA  60
   61 VQIVVHLKYF LHLDGSNGQR WNVMALLFTV LILFIVLAGS LWIMHNMNAN MMPWMK

Type	Start	End	Confidence
Cytoplasmic	1	19	0.59
Transmembrane Helix	20	41	0.92
Non-Cytoplasmic	42	48	0.55
Transmembrane Helix	49	71	0.90
Cytoplasmic	72	82	0.53
Transmembrane Helix	83	105	0.93
Non-Cytoplasmic	106	116	0.59