YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68529078, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTFWNAARRR LLSHALISAA LACGVPAAQA ADSSFPTRPV RLVVGYAAGG ATDVLARLVA  60
   61 QKMGEALGQP IVVENRAGAN SNVGAEVVAK ATPDGYTLYV FTIANTINAT LYDKLGYDPV 120
  121 RDFEPVGMIA KIPNVLVVNP KLPVKTVADY VRLAKESPDG VTFASSGSGS SIHLSGEMFR 180
  181 SRSGANMLHV PYKGSAPAVT DLLGGQVQSM FDNAPSALPH VKSGKLRAIA VTSAQRMPQL 240
  241 PDVPTVAESG LPGFDVQSWF SIAAPAGTPK PVIDKLNTAL NKALNASEVR ERMRDLAATP 300
  301 EPGTPEQLRT FAASEIKRWH DVVKQSGARV N

Type	Start	End	Confidence
Signal Peptide	1	30	0.99
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	331	0.99