YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|48765099
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGASVQPRRG GRRKRSHQMS DINVTPMVDV MLVLLIIFMV TAPLLTTGVK VDLPRTSAPS  60
   61 LDQDNQSLTV SVGADGTLYV QDKVTDESEL MARMQAITGV NPEARIYVRG DAGINYGRVM 120
  121 EVMGILRSAG YTKVALVTQP GAPGAAQAKP AATAPAAKAP AAKPKN

Type	Start	End	Confidence
Cytoplasmic	1	20	0.84
Transmembrane Helix	21	45	0.84
Non-Cytoplasmic	46	166	0.88