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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|48763583
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIGPLALVI SLSQQMCVYL VVAYLLSKTP LFIPLVHVTI RLPHKAACYA IFSLFCIMGT  60
   61 YFGLRIDDSI ANTRAIGAVL GGMLGGPSVG LAVGLTGGLH RYSMGGFTAL ACAISTTAEG 120
  121 LIGGLVHRYL VSRGQTGKLF QPLVVGLVTL FAEVCQMLII ILVARPAVNA VHLVETIALP 180
  181 MLVANSVGAA MFMTILLDRR TMFETQSSVF SAKALKIAAR AEGALRSGFN RENSMRVARI 240
  241 IYEETGVGAV AITDRDKILA FIGIGDDHHK PGMAVTSLQT LESIRENRVM YADGNEVAYQ 300
  301 CSISPTCPLG AALVIPLVDE GEQVIGTIKL YEPKTRLFST INRTLGEGVA RLLSTQILAG 360
  361 RYEQQRQLLA QSEIKLLHAQ VNPHFLFNAL NTLSAVIRLD PDHARHLVQS LSTFFRKNLK 420
  421 RTSEQVTLND EVEQVSAYLE IELARFGDRL SVDFNVPADL GTATLPTFSL QPLVENAIKH 480
  481 GTAQLLGDGR IGVSAERQGG DLVVRVEDNA GLYERRPGGD GLGMNLVDRR IRARYGQGYG 540
  541 LSVECERDVV TRVILRVPFD PSPAGVASPA FEKVGP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle