YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77382339, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNDHPPLAIS RRRFLILGAV TATAFAMPPF INLKAYAASL EQPAMAKVTI EVNGKPQTLE  60
   61 IDTRTTLLDA LREHLQLTGS KKGCDHGQCG ACTVIVDGRR INSCLTLAVM QDGAKVTTIE 120
  121 GLGMPDHLHP MQAAFIKHDG YQCGYCTPGQ ICSAVAVLQE IRDGIPSHAS ASLTEAPQLI 180
  181 ASELQERMSG NICRCGAYSN IIEAISEVAE VPA

Type	Start	End	Confidence
Signal Peptide	1	26	0.85
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	213	0.97