YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77457194, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKFPLITGL ALSLLACSSA FAAEKTLRIG IEAAYPPFAS KTDKGEIVGF DYDIGNALCA  60
   61 QMQVKCVWVE GEFDGLIPSL KVKKIDMALS SMTINEDRKK SVDFTHKYYF TSSRLVMKEG 120
  121 ASVDDQYASL KGKTVGVQRA TTTDRYATEV FEPKGINVKR YGNNEEIYMD LAAGRLDAIF 180
  181 ADTIPLTDFL SMPRGKGYAF VGPELKDPKY VGEGAGIAVR KGNTELVSQL NTAIDGIRAS 240
  241 GEYQKISEKY FKSDIYGD

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	258	0.99