YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77457102, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKALRFFGW PLLAGVLIAL LIIQRYPQWV GLPSLDVNLQ QAPQTTSVQQ GPVSYADAVT  60
   61 IAAPSVVNLY TTKVINKPSH PLFEDPQFRR FFGDNSPKQK RMESSLGSGV IMSPEGYILT 120
  121 NNHVTSGADQ IVVALKDGRE TLARVIGSDP ETDLAVLKID LKNLPAITVG RSDNIRIGDV 180
  181 ALAIGNPFGV GQTVTMGIIS ATGRNQLGLN NYEDFIQTDA AINPGNSGGA LVDANGNLTG 240
  241 INTAIFSKSG GSQGIGFAIP VKLAMEVMKS IIEHGQVIRG WLGIEVQPLT QELAESFGLS 300
  301 GRPGIVVAGI FRDGPAQKAG LQLGDVILSI DGEPAGDGRK SMNQVARIKP TDKVTIQVMR 360
  361 NGKELKLTAE IGLRPPPAPV KEKEE

Type	Start	End	Confidence
Signal Peptide	1	27	0.62
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	385	0.97