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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|77380892, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDSITFDLP ISGMTCASCA GRVERALSKV SGASAVSVNL ATEQARVQAP GDSLPALMEA  60
   61 VERAGYSVPQ QTVELNIDGM TCASCVGRVE RALNKVAGVK SVSVNLANER AHLELLGAVD 120
  121 PQTLIAAVSK AGYSASLFEL EHPQTDNRQQ RLNHERWALI CAIALALPLV LPMLLQPFGI 180
  181 HWMLPAWAQF ALATPVQFIF GARFYVAAWK AVRAGAGNMD LLVALGTSAG YGLSLYEWAT 240
  241 AAGRMPHLYF EASAVVIALV LLGKYLESRA KRQTASAIRA LEALRPERAI QVIDGREQDV 300
  301 AISALRLGDL VLVKPGERFP VDGEVLEGQS HADEALISGE SLPVPKQPGD KVTGGAINGE 360
  361 GRLLVSTTAL GAESVLARII RLVEDAQAAK APIQKLVDKV SQVFVPTVLL LALATLIGWW 420
  421 LYGAPLETAL INAVAVLVIA CPCALGLATP TAIMAGTGVA ARHGILIKDA EALERAHEVS 480
  481 AVVFDKTGTL TSGTPRIAHF SAVDGDENAL LTAAGALQRG SEHPLAKAVL DACSERNLTV 540
  541 PDVSDSQSLP GRGIAGSLDG RRRALGNRRL LEESGLNAGD LSESAKAWET EGRTLSWLIE 600
  601 QSPAPRVLGL FAFGDTLKPG ALHAVQQLAA QHIHSHLLTG DNRGSARVVA EALGIENVHA 660
  661 EVLPAEKAAT VAELKKTGVV AMVGDGINDA PALAAADIGI AMGGGTDVAM HAAGITLMRG 720
  721 DPRLVPAALE ISRKTYAKIR QNLFWAFVYN LIGIPLAAFG FLNPVLAGAA MALSSVSVVS 780
  781 NALLLKTWKP EDLEDNR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle