YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77385958, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVKKRGLGR GLDALLSGPT VSSLEEQAAQ ADSRELQHLP LDLLQRGKYQ PRRDMDPQAL  60
   61 EELAQSIKAQ GVMQPIVVRP IGGGRFEIIA GERRWRASQQ AGQETIPAMV RDVPDETAIA 120
  121 IALIENIQRE DLNPIEEAVA LQRLQQEFQL TQQQVAEAVG KSRVTVANLL RLIALPEVIK 180
  181 TMLSHGDLEM GHARALLGLP DNQQVEGARH VVARGLTVRQ TEALVRQWLS GKPEPVEPAK 240
  241 PDPDIARLEQ RLAERLGSAV QIRHGKKGKG QLVIGYNSLD ELQGVLAHIR

Type	Start	End	Confidence
Signal Peptide	1	31	0.77
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	290	0.99