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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|77381766, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEAVADNVP AKATPIDGKP PLFGLSFLEN LSEMTVLRQV GLLVGLAASV AIGFAVVLWS  60
   61 QQPDYRPLYG SLAGMDAKQV MDTLASADIP YTVEPNSGAL LVKADDLSRA RLKLAAAGVT 120
  121 PSDGNIGFEI LDKEQGLGTS QFMEATRYRR GLEGELARTI SSLNNVKGAR VHLAIPKSSV 180
  181 FVRDERKPSA SVLVELYSGR SLEPGQVVAI INLVATSVPE LSKSQITVVD QKGNLLSDQA 240
  241 ENAEMTMAGK QFDYSRRMES MLTQRVHNIL QPVLGNDRYK AEVSADVDFS AVESTAEQFN 300
  301 PDQPALRSEQ SVNEQRTASN GPQGVPGALS NQPPSPASAP QTTGGAAAPA SMVQPGQPLV 360
  361 DANGQQIMDP ATGQPMLAPY PADKRQQSTK NFELDRSISH TKQQQGRLNR LSVSVVVDDQ 420
  421 VKINPANGET TRAPWSADEL ARFTRLVQDA VGFDASRGDS VSVINMPFSA ERGEVIADIP 480
  481 FYSQPWFWDI VKQVLGVLFI LVLVFGVLRP VLNNITGGGK SKELAGLGGD MELGGMGGLD 540
  541 GELSNDRVSL GGPTSILLPS PSEGYDAQLN AIKSLVAEDP GRVAQVVKEW INADE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle