YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77381775, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.85
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKSEAAAVK DPATKGKLKL IIVIVLGLLL AIGTSVGATW FFMHSAQSKP AATAEAAPVG  60
   61 KQPAIFEPMA PAFVANYNQN GRQRYMQVSI TMLARNQADL EALKVHMPVI RNNLVMLFSG 120
  121 QDFATLATPV GQEMLRQKAT ASVQEVAQKE LGKVVIEQLL FTNFVLQ

Type	Start	End	Confidence
Cytoplasmic	1	19	0.81
Transmembrane Helix	20	42	0.81
Non-Cytoplasmic	43	167	0.94