YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77380411, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIIRTRQRP FLVLLDAFFT VLAWIGLLYL LVRGLWPLID THEGGPRLDN SAFEALGTLQ  60
   61 IYLWVAVVNA VILIGWARYQ QRKSRSFAQR RLPSPVVDDE GLSRSFKLCD ERFQKLRGPG 120
  121 VMTIHNDQDG DVSHVVPHLW PVQPQELPSP LAPLEHPRVI FLHAEDDDNR EPLNRIT

Type	Start	End	Confidence
Cytoplasmic	1	10	0.97
Transmembrane Helix	11	32	0.92
Non-Cytoplasmic	33	57	0.91
Transmembrane Helix	58	79	0.89
Cytoplasmic	80	177	0.99