YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|48728949, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLRYPQVLL LLCVFTAVSP VIAADGVKLD TPVGGWRSGA PEGEGESFRQ TVNYPASSVS  60
   61 TPIGQANTAR ISGEIKATPK NKEPGRLIVN GVSMPLKIDD SGRFDRPFSF PNGSNSVEVR 120
  121 SPDGQQRHRT QFLNTSGGAT PAKLRVLLAW DSDGTDLDLH LVTPDGAHIW YGDRVAPNGA 180
  181 ALDVDVTTGY GPEIFAMPAP IKGQYLVYVN YFGGGYRGDD EGGEEAVQPL TTAQVTVITE 240
  241 EGTPSEKMET FIVPMRAVGE LTLVKSFSYP

Type	Start	End	Confidence
Signal Peptide	1	23	0.99
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	270	0.99