YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77460163, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNLNDLTAL ALPSGSQLVA DATESRLSLS LEGQPLIRLR LDREGQGPIQ IDERYALPPG  60
   61 QALWAACYWL FARDPACQRL IWQLDQAPTE ALLSGLLVST EVAGEYRCER TLFWQLPQPW 120
  121 LGTSLTGSYP QQMVISNGKR HPLRPVKPRG EVYRRFDARL GARISLRTVE IEQDLARFNR 180
  181 WQNSPRVASF WQEEGSLEQH REYLSKLDAD PHTLTLIGCF DDQPFAYFEA YWAKEDRIAP 240
  241 FYDADNYDRG IHMLVGEEDH RGPHKVASWL SALVHYLFLD DPRTQRVVAE PRADNAKMIG 300
  301 HMHNQCFHCE KEFDFPHKRA ALMILGRERF FDRCTLV

Type	Start	End	Confidence
Signal Peptide	1	22	0.84
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	337	0.99