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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|48728471, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.31
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSTGLIAA VALAYMAIMF AIAFYGDRRS TPLPPRVRAW VYSLSLAVYC TSWTFFGAVG  60
   61 QAAEQLWSFL PIYLGPILLL LGAPWVLQKM VMISKQENIT SIADFIAARY GKSQSLAVVV 120
  121 ALICLVGVLP YIALQLKGIV LGVNLLIGAG ADAMGTRAQD TALIVSLVLA LFTIVFGTRN 180
  181 LDATEHHRGM VLAIAFESLV KLFAFLAVGA FVTYGLYDGF DDLFNQAMLA PRLEEYWKET 240
  241 INWPSMVVQT GVAMMAIICL PRQFHVTVVE NIDPQDLRLA KWVFPAYLAL AALFVVPIAL 300
  301 AGQMMLPNSV IPDSFVISLP LAQAHPALAM LAFIGGASAA TGMVIVASVA LSTMVSNDML 360
  361 LPWLLRRNNA ERPFEVFRQW MLSVRRVSIV VILLLAYVSY RLLGSTASLA TIGQIAFAAV 420
  421 TQLAPAMLGA LYWKQANRRG VFAGLAAGTF LWFYTLVLPI AARSLGWSLD SFPGLAWLHS 480
  481 NPLNLPITPL TQGVVLSLAG NFTLFAWVSV LSRTRVSEHW QAGRFIGQEI SARPSARSML 540
  541 AVQIDDLLQL AARFVGEERA RQSFIRFAYR QGKGFNPNQN ADGEWIAHTE RLLAGVLGAS 600
  601 STRAVVKAAI EGREMQLEDV VRIADEASEV LQFNRALLQG AIENITQGIS VVDQSLKLVA 660
  661 WNRRYLELFN YPDGLISVGR PIADIIRHNA ERGLCGPGEA EVHVARRLHW MRQGRAHTSE 720
  721 RLFPNGRVIE LIGNPMPGGG FVMSFTDITA FREAEQALTE ANEGLEQRVS ERTQELSQLN 780
  781 VALTEAKGNA EAANQSKTRF LAAVSHDLMQ PLNAARLFSA ALSHQADGLS EEAQKLVQHL 840
  841 DSSLRSAEDL ISDLLDISRL ENGKINPDRK PFAVNELFDI LGAEFKALAQ EQGLSFRVRG 900
  901 SQLRIDSDIK LLRRILQNFL TNAFRYAKGP VLLGVRRRKG EICLEVWDRG PGIPEDKQQV 960
  961 IFEEFKRLDS HQTRAEKGLG LGLAIADGLC RVLGHTLRVR SWPGRGSVFS VRVPLAKAQT1020
 1021 VQPTAAVEIN GKLHSGAQVL CIDNEDSILI GMNSLLTRWG CQVWTARNRE ECAALLDEGV1080
 1081 RPQLALVDYH LDHGETGTEL MAWLRTRLGE PVPGVVISAD GHPETVAQVH AAGLDYLAKP1140
 1141 VKPAALRALL SRYLPL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle