YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|2647949
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKVFTLAEV SEHNNAKDCW LIIDGKVYDV TKFLEDHPGG DEVLLSATGK DATDDFEDVG  60
   61 HSSTAKAMMD EFYVGDFDTS TVPTKTQYTP PKQPHYNQDK TSDFIIKLLQ FLVPLFILGV 120
  121 AVGIHFYTKS SA

Type	Start	End	Confidence
Cytoplasmic	1	107	0.85
Transmembrane Helix	108	127	0.93
Non-Cytoplasmic	128	132	0.78