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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|1235795
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKKLFTNRF ISFNMSLLLV LTAVFSSIPL HSVHAADNAS VVANIVGEFQ DQLGDSNWNI  60
   61 DSNITIMQYM GNGLYEFTTP TQLKAGSYQY KVALNHSWDG GGVPSQGNLT LNLANDSYVT 120
  121 FWFDYNTQSV TDSTKYTPIA NDKLPRLVGT IQSAIGAGND WKPETSTAIM TDDNFDNVYS 180
  181 YTAHVPKGDY QYKVTLGNTW DENYGANGVK DGSNIQINVT NDADITFYYD ANTHNIWTNY 240
  241 SPILTGLDNN IYYDDLKHDT HDSFFRNPFG AVKVDQTVTL RIQAKNHDLE SARISYWDDI 300
  301 NKIRIELPMT RIGESPDGNF EYWEIKLSFD HPTRIWYYFI LKDGTKTAYY GDNDDQLGGV 360
  361 GKATDTVNKD FELTVYDKNF DTPDWMKGAV MYQIFPDRFY NGDTSNDHAK TLSRGNDPIE 420
  421 FHNNWNDLPD NPNNAGTPGY TGDGIWSNDF FGDLKGIDDK LDYLKGLGVS VIYLNPIFES 480
  481 PSNHKYDTAD YTKIDEMFGT TQDFEKLMSD AHAKGIKIIL DGVFNHTSDD SIYFNRYGKY 540
  541 PGLGAYQAWK EGNQSLSPYG DWYTINSDGT YECWWGYDSL PVIKSLNGSE YNVTSWANFI 600
  601 INDENAISKY WLNPDGNLND GADGWRLDVE NEVAHDFWTH FRNAINTVKF EAPMIAENWG 660
  661 DASLDLLGDS FNSVMNYQFR NDIIDFLIGQ SFDDGNGQHN PIDAAKLDQR LMSIYERYPL 720
  721 PAFYSTMNLL GSHDTMRILT VFGYNSADPN ENSDAAKQLA EQKLKLATIL QMGYPGMADI 780
  781 YYGDEAGVSG GKDPDDRRTF PWGNEDTTLQ DFFKNISSIR NNNQVLKTGD LETLYAQNDV 840
  841 YAIGRRIING KDAFGTSYPD SAAIVAINRS KSDKQIAIDT TKFLRDGVTF KDLINNNVSY 900
  901 SISNGQIVID VPAMSGVMLI SDDGQDLTAP QAPSNVVVTS GNGKVDLSWL QSDGATGYNI 960
  961 YRSSVEGGLY EKIASNVTET TFEDANVTNG LKYVYAISAI DELGNESGIS NDAVAYPAYP1020
 1021 IGWVGNLTQV SDNHIIGVDK PTEDIYAEVW ADGLTNSTGQ GPNMIAQLGY KYVSGTVYDS1080
 1081 VYGSVYNSVY GVDDSGFTWV NAQYVGDIGN NDQYKASFTP DKIGQWEYLM RFSDNQGQDW1140
 1141 ITTSTLSFYV VPSDDLIKPT APYLNQPGTE SSRVSLTWNP STDNVGIYDY EIYRSDGGTF1200
 1201 NKIATVSNEV YNYIDTSVIN GVTYNYKVVA VDLSFNRTES NVVTIKPDVV PIKVIFNVTV1260
 1261 PDYTPDAVNL AGTFPNATWD PSAQQMTKID NNTYSITLTL DEGTQIEYKY ARGSWDKVEK1320
 1321 DEYGNEFASN RKVTIVNQGN NEMTINDTVY RWRDIPIFIY SPSSNMTVDS NISTMEVKGN1380
 1381 TYKGAKVTIN GDSFVQDKNG VFTKDVSLNY GVNKIKIHVE PNDGSVYGND QGRITELTKD1440
 1441 IEIDVIRQEN NSGSGTGNNN TSTSGSNSSS TGSGSTGSTS ITSNISNTSN TSNTIGVITK1500
 1501 NGNVITLTLD AGKAKDLIVN SKDKKVVFDI TTIGEGQQKV VQISKDILDT SAANGKDIVI1560
 1561 KSDNASIALT KDALNQNQIQ NGVNVSIKDN GKPNVTNYVS LSNVVDITIS GISGNVTLAK1620
 1621 PVEVTLNISK ANDPRKVAVY YYNPTTNQWE YVGGKVDASS GTITFNATHF SQYAAFEYDK1680
 1681 TFNDIKDNWA KDVIEVLASR HIVEGMTDTQ YEPNKTVTRA EFTAMILRLL NIKEETYSGE1740
 1741 FSDVKSGDWY ANAIEAAYKA GIIEGDGKNA RPNDSITREE MTAIAMRAYE MLTQYKEENI1800
 1801 GATTFSDDKS ISDWARNVVA NAAKLGIVNG EPNNVFAPKG NATRAEAAAI IYGLLEKSGN1860
 1861 I

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