YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|20151955
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVEGLYLYM LVVKTFSGDN LRFNIYASIG WGGPALFVVT WAVAKSLTVT YSTPEKYEIN  60
   61 CPWMQETHVD WIYQGPVCAV LIINLTFLLR IMWVLITKLR SANTVETRQY RKAAKALLVL 120
  121 IPLFGITYLV VLAGPSESGL MGHMFAVLRA VLLSTQGFSV SLFYCFLNSE VRNALRHHIS 180
  181 TWRDTRTIQL NQNRR

Type	Start	End	Confidence
Cytoplasmic	1	22	0.94
Transmembrane Helix	23	44	0.92
Non-Cytoplasmic	45	71	0.97
Transmembrane Helix	72	94	0.94
Cytoplasmic	95	113	0.94
Transmembrane Helix	114	134	0.92
Non-Cytoplasmic	135	144	0.83
Transmembrane Helix	145	167	0.92
Cytoplasmic	168	195	0.97