YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|1255178
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LLLVLSGALA LTQTRAGSHS MRYFYTSMSR PGRWEPRFIA VGYVDDTQFV RFDSDAASQR  60
   61 MEPRAPWVEQ EGPEYWDRET RNMKAETQNA PVNLRNLRGY YNQSEAGSHT IQRMYGCDLG 120
  121 PDGRLLRGYH QSAYDGKDYI ALNEDLRSWT AADMAAQNTQ RKWEAAGEAE QHRTYLEGEC 180
  181 LEWLRRYLEN GKETLQRADP PKTHVTHHPV SDQEATLRCW ALGFYPAEIT LTWQRDGEDQ 240
  241 TQDTELVETR PAGDGTFQKW AAVVVPSGKE QRYTCHVQHE GLREPLTLRW EPSSQSTILI 300
  301 VGIIAGLVLL GIVVIGAVIA AVIWRRKSSD RKGGSYSQAA SSDSAQGSDV SLTACKV

Type	Start	End	Confidence
Non-Cytoplasmic	1	297	0.98
Transmembrane Helix	298	323	0.92
Cytoplasmic	324	357	0.97