YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|19571103, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEVFEGYER QYCEVSASLF RKCTTASALD GEKKKQKLSE IQSGVEEAES LIRKMDLEAR  60
   61 SLQPSVKAGL LAKLREYKSD LNNLKSELKR ISAPNARQAT REELLESGLA DTLAASTDQR 120
  121 GRLMMTTERL NQSNDKIKES RRTILETEEL GVSILQDLHQ QRQSLLHAHT TLHGVDDNVG 180
  181 KSKKILAAMS KRMDRNKWII GGIIAALVLA ILLILYFKLA Y

Type	Start	End	Confidence
Cytoplasmic	1	197	0.97
Transmembrane Helix	198	217	0.97
Non-Cytoplasmic	218	221	0.66