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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28564581
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELLVHISFQ RNNWQKQVHR TAPFMKIALS FLLHILLFHG FNLVLAVSAS DDQFVFSGFS  60
   61 GANVTLDGTA TVTAGGLLEL TNGTTQLKGH AFFPAPLSFR GSLNGTVQSF SASFVFAILT 120
  121 SYPNLSCHGI AFVVAPSNNL STALAAQYMG LTNIDNNGNA SNHIFAAEID TMQNVEFQDI 180
  181 NNNHIGVDIN GLHSVESHYA GYYDKNGSFH NMNLISGDVM QAWVDYDGDI AQINITIGPI 240
  241 DMSKPGRSLI STTYNLSDVL MEPSFIGFSS ATGPINSRHY ILGWSFGMNK PAPNIDIAKL 300
  301 PKLPRLAPKP QSKVLVILLP IAIAAFILSV GIAMVFLVRR RQRYAELRED WEDEFGPHRF 360
  361 AYKDLLHATD GFSDKHILGA GGFGRVYKGI LPKSKLEVAV KRVSHESRQG MKEFVAEVAS 420
  421 IGRIRHRNLV QLLGYCRRKG ELLLVYDYMS NGSLDRYLHY EGNKPVLDWV QKFQIIKDVA 480
  481 SGLLYLHEKW DKVVIHRDIK ASNVLLDKEM NARLGDFGLA RLYDHGTDAH TTHMVGTMGY 540
  541 LAPELIHTGK ASTLTDVFAF GTFLLEVICG QRPIKEDAHG NQILLVDWVL EHWHNESLLD 600
  601 TVDPRLQGDY NVEEACLVLK LGLLCSHPST NARPCMQQVV DYLEGDTPVP ELASTHRNFN 660
  661 ELASMRKKGF DPYIMSYNPS STVSFGTVSD LSGGR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle