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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7542565
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTDSPASKG REQCKPVVCG EGACQHGGLC VPMGHDIQCF CPAGFSGRRC EQDIDECASQ  60
   61 PCYNGGQCKD LPQGYRCECP AGYSGINCQE EASDCGNDTC PARAMCKNEP GYKNVTCLCR 120
  121 SGYTGDQCDV TIDPCTANGN PCGNGASCQA LEQGRYKCEC VPGWEGIHCE QNINDCSENP 180
  181 CLLGANCTDL VNDFQCACPP GFTGKRCEQK IDLCLSEPCK HGTCVDRLFD HECVCHPGWT 240
  241 GSACDINIDD CENRPCANEG TCVDLVDGYS CNCEPGYTGK NCQHTIDDCA SNPCQHGATC 300
  301 VDQLDGFSCK CRPGYVGLSC EAEIDECLSD PCNPVGTERC LDLDNKFECV CRDGFKGPLC 360
  361 ATDIDDCEAQ PCLNNGICRD RVGGFECGCE PGWSGMRCEQ QVTTCGAQAP CQNDASCIDL 420
  421 FQDYFCVCPS GTDGKNCETA PERCIGDPCM HGGKCQDFGS GLNCSCPADY SGIGCQYEYD 480
  481 ACEEHVCQNG ATCVDNGAGY SCQCPPGFTG RNCEQDIVDC KDNSCPPGAT CVDLTNGFYC 540
  541 QCPFNMTGDD CRKAIQVDYD LYFSDPSRST AAQVVPFPTG EANSLTVAMW VQFAQKDDRG 600
  601 IFFTLYGVQS ARMTQQRRML LQAHSSGVQV SLFEDQPDAF LSFGEYTSVN DGQWHHVAVV 660
  661 WDGISGQLQL ITEGLIASKM EYGAGGSLPG YLWAVLGLPQ PYGLSNELAY SDSGFQGTIT 720
  721 KAQVWARALD ITSEIQKQVR DCRSEPVLYP GLILNWAGYE VTSGGVERNV PSLCGQRKCP 780
  781 VGYTGANCQQ LVVDKEPPVV EHCPGDLWVI AKNGSAVVSW DEPHFSDNIG VTKIYERNGH 840
  841 RSGTTLLWGT YDITYIASDA AGNTASCSFK VSLLTDFCPA LADPVGGSQV CKDWGAGGQF 900
  901 KVCEIACNAG LRFSEPVPEF YTCGAEGFWR PTREPSMPLV YPSCSPSKPA QRVFRIKMLF 960
  961 PSDVLCNKAG QAVLRQKVTN SVNGLNRDWN FCSYAIEGTR ECKDIQIDVK CDHYRGTQNN1020
 1021 RVRRQAKDGG VYVMEAELPV VNDPVVHTST GERSTVKQLL EKLILEDDQF AVQEILPNTV1080
 1081 PDPASLELGS EYACPVGQVV MIPDCVPCAI GTFYDSANKT CIACSRGTYQ SEAGQLQCSK1140
 1141 CPVIAGRPGV TAGPGARSAA DCKERCPAGK YFDAETGLCR SCGHGFYQPN EGSFSCELCG1200
 1201 LGQTTRSTEA TSRKECRDEC SSGQQLGADG RCEPCPRGTY RLQGVQPSCA ACPLGRTTPK1260
 1261 VGASSVEECT LPVCSAGTYL NATQNMCIEC RKGYYQSESQ QTSCLQCPPN HSTKITGATS1320
 1321 KSECTNPCEH IAEGKPHCDV NAYCIMVPET SDFKCECKPG FNGTGMACTD VCDGFCENSG1380
 1381 ACVKDLKGTP SCRCVGSFTG PHCAERSEFA YIAGGIAGAV IFIIIIVLLI WMICVRSTKR1440
 1441 RDPKKMLTPA IDQTGSQVNF YYGAHTPYAE SIAPSHHSTY AHYYDDEEDG WEMPNFYNET1500
 1501 YMKDGLHGGK MSTLARSNAS LYGTKEDLYD RLKRHAYTGK KEKSDSDSEV Q

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle