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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|17863020
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAETLVSIKR VQKYMQSDET NVMDMSVDLT EDFQGSNQET VHADGDEERD EAEDKLLGPP  60
   61 IATVNENAKL SEAGISISGL MAKWDVNSPD YSLNGVNLRV QPGTMLGIVG RTGSGKSSLI 120
  121 QAILGELPAE SGEIKVNGSM SYASQEPWLF SGTVRQNILF GQPMDRRRYA KVVKKCALER 180
  181 DFELLPFKDK TIVGERGASL SGGQKARISL ARAVYRETSI YLLDDPLSAV DTHVARHLFE 240
  241 QCMRGYLRER IVILATHQLQ FLQHADQIVI MDKGRVSAVG TYESLRESGL DFASMLADPE 300
  301 RDEQSEERSR SRSGSYTHSH SDQRRNSEQS LLSMADSCMD DLEAEQANNQ ERQEAGQIGL 360
  361 RLYSKYFKAG GGFFAFFVMM GFCVLSQGLA SLGDYFLSYW VTKKGNVAYR ADNNDTTRSE 420
  421 ELEPRLSTWL RDIGLSVDAE MLDTYIFTVI TVLTILVTVA RSFLFFNLAM KASIRLHNSM 480
  481 FRGITRAAMY FFNTNPSGRI LNRFSKDMGQ VDEILPAVMM DVIQIFLALA GIVIVIAVVN 540
  541 PLFLIPTVVL GIIFYQLRTF YLKTSRDVKR MEAITRSPVY SHLAASLTGL STIRAFGAQR 600
  601 VLEAEFDNYQ DMHSSAFYMF ISTSRAFGYW LDCFCVIYIA IITLSFFIFP PANGGDVGLA 660
  661 ITQAMGMTGM VQWGMRQSAE LENTMTAVER VVEYEDIEPE GALEAPADKK PPKSWPEQGK 720
  721 IVFDELSLRY TPDPKSENVL KSLSFVIKPK EKVGIVGRTG AGKSSLINAL FRLSYNDGSV 780
  781 LIDKRDTSEM GLHDLRSKIS IIPQEPVLFS GTMRYNLDPF DEYSDDKLWR SLEEVKLKEV 840
  841 VADLPSGLQS KITEGGTNFS VGQRQLVCLA RAILRENRIL VMDEATANVD PQTDGLIQTT 900
  901 IRNKFKECTV LTIAHRLHTI MDSDKVLVMD AGRAVEFGTP YELLTLADSK VFHGMVKQTG 960
  961 HATYESLLKI AQKAFENRQN HSLSS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle