YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	tgy-PD
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGEYIILEN SSTYPGFHSS SNGLANGMYR SAQRISTDRL VLLILLVSTT VIGLFAYWDV  60
   61 MVLNAGALPL SRGTSSVDYM EPGLRNETLA EKMHREVRVL CWVLTTPKYH KTRAIHVLRT 120
  121 WGKRCNKIYF MTSEPDDELP TVVLTKPDRY EMLWGKTKEA FVHIHEQMRH EADWFIKADD 180
  181 DTYVKDSDS

Type	Start	End	Confidence
Cytoplasmic	1	39	0.91
Transmembrane Helix	40	61	0.92
Non-Cytoplasmic	62	189	0.95