YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|16769754
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRRGVLSTT NTRKVMTGLA AFGPAIFMVG ASYAGCDRVL VVVLFTICMG LMGAYYAGMK  60
   61 LSPLDMSPNY AGTLMAITNG IGAITGVITP YLVGVMTPNA SLLEWRLVFW VAFGVLCFTA 120
  121 VIYCIWASGE VQPFNNAPIQ PRSVDFEAQE RKVGGEKTSG LEQSS

Type	Start	End	Confidence
Cytoplasmic	1	14	0.83
Transmembrane Helix	15	34	0.90
Non-Cytoplasmic	35	38	0.76
Transmembrane Helix	39	59	0.91
Cytoplasmic	60	69	0.79
Transmembrane Helix	70	93	0.87
Non-Cytoplasmic	94	106	0.76
Transmembrane Helix	107	127	0.95
Cytoplasmic	128	165	0.87