YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|16768518
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMPSPSGKSN SSTGSTATSS SSSASGQSGE EGYQRFSNIY EQVQPAPSTQ PQEDATATPF  60
   61 QRSAPIYWTL QNRRSQPRPQ PAGNVTCRDD LYATPIRRAD RLPRPVAAAA ATAAEGNRSN 120
  121 ISPIVPRNRS GAFLTSTPTR SGEGERDSEN TQLPPMKQPS RNWTDDAPER LNTCADRIGQ 180
  181 SKTTLMDFKK LLLAKSAKAS PVQRKVSAVE LLKKPAQATA TPPVVKPSGP GQKVASAGSK 240
  241 PTINTSLKLL DLSGSPKTFA NRRMLRQGQF GSPSKTFAPK MRGPVNMVAA AAAPPRTDIM 300
  301 STTIPEANSE EDHSNTSGGS RASSEAGETV PSSFDLKRNF FLQTEENNFM RGELKPSFAR 360
  361 SNGAAGGGST EGVNKYVAAP VANPPLPSFE TAL

Type	Start	End	Confidence
Signal Peptide	1	26	0.93
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	393	0.99