YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|16768302
Protein type: Globular with Signal Peptide
Type Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAASKVSIS MGTAMASGAP PPAIVAPPPK PDRRERGGGR DRGDRIDRGE RGDDKRAEDL  60
   61 THKDKEKELE AIRERYLGII KKKRRVRRLN DRKFVFDWDA GEDTSIDYNN LYKERHHVQF 120
  121 FGRGNVAGID IKEQKRTQSK FYGDLLEKRR TEAEKEQEKV RLKKMKRKED KQKWDDRHWS 180
  181 EKENDEMTER DWRIFREDYN VTIKGGRIPN PIRSWNESGF PKEIIDIIDK VGYKEPTPIQ 240
  241 RQAIPIGLQN RDIIGVAETG SGKTLAFLIP LLSWIQSLPK IERLEDVDQG PYAIIMAPTR 300
  301 ELAQQIEEET TKFGQPLGIR TVVVVGGLSR EEQGFRLRLG CEIVIATPGR LIDVLENRYL 360
  361 VLNQCTYIVL DEADRMIDMG FEPDVQKILE YMPVTNLKPD TEEAEDETKL MENFYTKKKY 420
  421 RQTVMFTATM PPAVERLART YLRRPATVYI GSVGKPTERT EQIVYMMGEN DKRKKLMEIL 480
  481 SRKIDPPVII FVNQKKGADV LAKGLEKLGY NSCTLHGGKG QEQREYALAA LKSGAKDILV 540
  541 ATDVAGRGID IKDVSLVINY DMAKTIEDYT HRIGRTGRAG KTGCAISFVT KDDSALFYDL 600
  601 KQCVSASPVS TCPPELMNHP EAQHKPGTVV TKKRREEKIF A

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle