YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|16767960
Protein type:	Transmembrane
Type Confidence:	0.52
Topology Confidence:	0.44
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNPDVERLR LFWTRFQDLW LALHLCGLPT AAAINGHSPA AGCVLATACE YRVMLPNLFI  60
   61 GIHATRFSFV ISKWMMNSYQ SVLPRRIVER ALNQGKLFAS QEALDVGLVD EIACSKEEAL 120
  121 SKCAAFIATF DKTNPVARCL TKRMCREPDV RELLQDRAAD LKECVDYVTT PLFQEGLCAH 180
  181 LEGLKKRK

Type	Start	End	Confidence
Cytoplasmic	1	19	0.44
Transmembrane Helix	20	34	0.50
Non-Cytoplasmic	35	188	0.56