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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15291179
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDEAASEIHQ TTIRLRPPKK YPTPYGGRLV WTLPGKTKFI THLKDKDRIR HRKRWSQVMY  60
   61 MYYLLGHRLM ELPISVDRKD AIAENTYLLT LDGDIDFKPN AVTLLVDLMK KNKNLGAACG 120
  121 RIHPVGSGPM VWYQLFEYAI GHWLQKATEH MIGCVLCSPG CFSLFRGKAL MDDNVMKKYT 180
  181 TRSDEARHYV QYDQGEDRWL CTLLLQRGYR VEYSAASDAY THCPEGFNEF YNQRRRWVPS 240
  241 TIANIMDLLA DAKRTIKIND NISLLYIFYQ MMLMGGTILG PGTIFLMLVG AFVAAFRIDN 300
  301 WTSFHYNIVP ILAFMFICFT CKSNIQLFVA QVLSTAYALI MMAVIVGTAL QLGEDGIGSP 360
  361 SAIFLISMVG SFFIAACLHP QEFWCITCGL IYLLSIPSMY LLLILYSIIN LNVVSWGTRE 420
  421 VVAKKTKKEL EAEKKAAEEA KKRVKQKSML SFLQSGIGDN GDEEGSVEFS LAGLFRCIFC 480
  481 THGKTSDEKQ QLTSIAESLD TIKHRMDTIE SAVDPHGHHA SRHGRRRTTS SGSKDHHLLT 540
  541 SVAEKSGDES DESDSDTSAE PKQERDFLTN PYWIEDPDVR KGEVDFLSST EIQFWKDLID 600
  601 QYLYPIDNDP VEQARIAKDL KELRDSSVFA FFMINALFVL IVFLLQLNKD NIHVKWPFGV 660
  661 RTNITYDEST QEVHISKEYL QLEPIGLVFV FFFALILIIQ FTAMLFHRFG TISHILASTE 720
  721 LNFCKKKSED LTQDQLIDKH AVEIVKNLQR LQGIDGDYDN DSGSGPDRIA RRKTIQNLEK 780
  781 ARQPRRQIGT LDVAFKKRFL KLTADAENNP ATPILTRRLT MRAETIRALE VRKNSVMAER 840
  841 RKSAMQTLGA KNEYGITTGA PINNNGALPN QRSGRVSNAG ISIKDVFNVN GGGAEQIYGS 900
  901 NGGGTINQGY EHVIDEDGDG NSLRLTTRNP HPHPHHQVSW GQNTNGGGGN GTGRL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle