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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG42668-PF
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLLQRIANW ASDNRDGNVA DKSAADAAKL NRKESYKAQR KNYRREKKRV ASELMNSLQD  60
   61 PAVIVLADWL KVRGTLKSWT KLWCVLKPGL LLIYKSQKTK SSHWVGTVML TSCQVIERPS 120
  121 KKDGFCFKLF HPLEQSIWAP RGPDKETIGA VVQPLPTAYL IFRAPSQAAG KCWMDALELS 180
  181 LRCSALLLRS NSSTGTAPTS SYIGEPLPVS HETQWSEADY EKHFNDHDLD ADSQNEAPNA 240
  241 VMSGLESESE SDPAEPAQDD VVDQQCVETS YVPFTEEEFG EQGEQVRPGM DLSKVVLPTF 300
  301 ILEPRSFLDK LSDSYYHADL LSKAVQEDDA FTRMKLVVQW YLSSFYKKPK GLKKPYNPIL 360
  361 GERFRCYWQH PSGSRTFYIA EQVSHHPPVS AFYVTNREDG FSITCSILAK SKFYGNSTSA 420
  421 VLEGAATMTL LPRGECYTAT TPYAHCKGIL MGTLSMELGG KINIECENTG YRTELEFKLK 480
  481 PFLGGADATN VVVGKIKLGK ETLATINGHW DKECRVKDSK TGEETVLFKV DAETRSKRLT 540
  541 RYMVPLDLQE ANESQRLWQR VSEAIANEDQ VAATEEKTVL EERQRADAKE RLSSDSVHMP 600
  601 DLFELDSYGQ WLYKYADLRP WDSRNDVRQY ECQFKVLTQT RHKSVPIVHG AEMIHPLRSS 660
  661 IETLSRTQRQ SPAGQPLPPG GSAVPKAKNK SLVLAPRDTN SDSSQSPQGA VKRSSSSAIK 720
  721 QLALAVDQVN RVLEQHTRQL NEISQRLERM QYSPPPSSMS AHSLHMLGGG VSQSTVIKSL 780
  781 IYALIGLAFS LILRWLFK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle