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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15291671
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSESIGLAF SDDSYTTSVP ESMEANSTLK LIQIVNSKTS GDGPPAFRCE FVSGNGGGIF  60
   61 NLSSADHGCN LLLIQPLDFE NKSSYSLQLR LTSHRYFVNP LKDTTSVEII VQDENDNAPE 120
  121 FEFNRLRGQQ DTFYTVVTEE MDVDTTILQV RATDRDSGKF GTVRYTLYDD DENRVNMPTS 180
  181 FFMMSEDTGV LRTAKHFKNE NDFPLTFLVE ARDSDGQEQG SHRTRARIVV NKLADINRMA 240
  241 LSFPNAAPSD LRNYYTELEE LLDKKTGLVS GIERMSSQKY LAKNGSVIEN PAATDIWFYL 300
  301 IDPKTEQLVS RKDSIVETTL LEPAARSELN IALPRATAEN ISFPLERKEH VHKVKAAVAI 360
  361 DNEVFPFTLI AISLVILILG TIGIIYICIS WSKYKNFKQR MRQYSSTNPP RYDPVIVNQQ 420
  421 ASSASETIAN MKEYETQMLA MAVPPDVDDD LQLDFSAKNH AFSLDNVSYI THKENTNGGG 480
  481 QSSPSHSDAT TATIATLRRH KNLNNASMNN NLAINNRQNT FNRTLEMNTR NNANPLASPP 540
  541 NGALSGTLTL GRIKHQNSNH YQNGAYNIDP TGPNNMAHAK NNAYSTMGRR GNTFGDVGLL 600
  601 NGNGELMNAT LGRNGQLNNR LYGGEVPITN PLFQRSNSDH NHLSSTNENV SFGKRDYGQI 660
  661 GFSYLNDLDR SEVETTTEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle