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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|5052634
Protein type: Globular with Signal Peptide
Type Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLLSLTDVM MIIFTLEAVY ALSALGARPC SMLMQVRGLI DQLVTLITVE AQSYGTGGCI  60
   61 LMRVVEVFPG NMAASLAQNM PAILAPGPTS LTTLPTSLQV AVKPPAVLPT PTPAQTQVLP 120
  121 HGEQTPLVTA LPGLPMPSLP QVQLPVPSLP QVQLPPIAAT VTLPSLPSAS QSFTHEDEQY 180
  181 ALAWLGATYE RAGNGNDLRV EQAELYRIYL SHCQKAGKLS VVNHMQFPRL VRLIFNQSVG 240
  241 PVIVRHLDGI ELPGTYYVGI RMRAQPLAMQ QRPTPSIVPV KKDTPILPKQ PFSDPVQTEV 300
  301 ASEESVSSAV TPPPSSSLIK SLLANKVTER QQKQKAQAQT PQPPALVATT ASGTNATQPI 360
  361 KVTSTAISAF VNNPLMQHTP VKVGQTTIKP LHPQMAIEKK PITDSAPPPL APLSGANVVT 420
  421 KDASGRTLII ASAAAKRKLT IDEEQNKRLA LDAAASSSSS SSSGGKEEAQ VTPSKNAANL 480
  481 YADLAASILE DEDMDDVPPL AKPSQEQSQQ HPQQAQQLQL IPAKVQPTQR QLVFPGSNVV 540
  541 SPAPHSQLKL ATTATIKTDQ GLQTVPVILQ PKTAMDSTPA PQTQYVLATN QQGQTYLVAQ 600
  601 QPTIPTSTQS APPTLLVTQT PQQQTKTIII LQQPGGVSAA NVAGTQKMIM TTAQGQQVLV 660
  661 TTTTAPQLAQ PRTSTPQQQI FIAPQRPVPA LGAGQMSPSL LSQLNQIPAT IKLHQPQPQP 720
  721 QLVSPQLAPQ QRLVAAKPGA SLPIPQLQQH QSIIQQHIIS GPSTPTSTVG GTVGGEKRQV 780
  781 ILGGIKETTL ITQTSATPAP LQQSQLNSQT IITQSPTSTA IVGGVALQQQ HHIRSVLDQQ 840
  841 QQHHPSIIQQ KITMPAISEA TKPKIAPVPV SPTVTLLAKK PAPPQPAQVS SPKPSVTQAV 900
  901 VVTTSGTSDS TEGGKTVVLA TSEAKPAESE VVAQTVVPPA VVTTGPSSSS LVVSQSVYAA 960
  961 SGPNANPTPS PMPVDANWLY ICDWRNCPRK KFKSLNELQY HVCSVHCPDH LDSDADIYCQ1020
 1021 WGSGPNFCDN RARKRYSLMT HLIDRHLTTE NLRASVQRRL ATGIHNVAPT QAPVTIVRNE1080
 1081 GHAQRLAGGA TGSPSGPASA VPVVGSAAMQ AMNRHTTDYT NAKELMDENE GPVTKSIRLT1140
 1141 AALIIRNLVT YSATAKRSLK RYESRLANVA FSNVEASGVL SHIMYELSQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle