YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|3811295
Protein type:	Transmembrane
Type Confidence:	0.63
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLDNINRAA VDRIIRVDHA GEYGANRIYA GQMRVLGRTS VGPVIQKMWD QEKDHLKKFN  60
   61 ELMVMFRVRP TVLMPLWNVL GFALGAGTAL LGKEGAMACT VAVEESIAHH YNNQIRTLME 120
  121 EDPEKYEELL QLIRKFRDEE LEHHDIGLDH DAELAPAYAV LKSIIQAGCR VAIYLSERL

Type	Start	End	Confidence
Cytoplasmic	1	71	0.51
Transmembrane Helix	72	91	0.57
Non-Cytoplasmic	92	179	0.85