YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|628017
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPLAGASRS RVWSAGLLRL LLLSCFTLQK AGGEIAVQVL SNSTGFLGGS TVLHCSLASK  60
   61 DNVTITQLTW MKRDPDGSPF RACLPPQEGP SISDPERVKF LVAKVYEDLR NASLAISNLR 120
  121 VEDEGIYECQ IATFPTGSKS ANVWLKVFAR PKNTAEALEP SPTLMPQDVA KCISADGHPP 180
  181 GRITWSSNVN GSYREMKETG SSRAPPQLSA TSPWCLLARQ MARTSPAQWN MKASRSRTSR 240
  241 PLILSLPYPP EVSISGYEGN WYIGLTNVNL TCEARSKPPP TNYSWSTATG PLPNSTHFQE 300
  301 NGSHLLISTV DDLNNTIFVC KAINALGSGQ GQVTILVKEA SEILPPKTKL RHWLHHCHRL 360
  361 LCPDHRSSSR HCILEIQAWL WSAVQDLRQG ERPLFSSEWR LCPKRGDEQL EVMVLG

Type	Start	End	Confidence
Signal Peptide	1	33	0.95
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	416	0.99